Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| LUAD | rs148655853 | chr17:45845654 | C/G | 1.02E-6 | 504 | 21.87 | 21.4 | 3.97 | KM Plot |
| LUAD | rs148928213 | chr10:45755073 | G/A | 3.02E-7 | 494 | 22.17 | 21.75 | 10.95 | KM Plot |
| LUAD | rs1511501 | chr4:132497131 | T/C | 2.45E-5 | 499 | 21.73 | 24.37 | 7 | KM Plot |
| LUAD | rs1525621 | chr7:123153111 | T/C | 1.11E-5 | 498 | 21.87 | 22.62 | 12.53 | KM Plot |
| LUAD | rs1608860 | chr7:123202153 | C/T | 1.05E-5 | 493 | 21.82 | 22.33 | 13.08 | KM Plot |
| LUAD | rs16868144 | chr7:158846831 | C/T | 1.04E-9 | 484 | 22.98 | 19.95 | 4.95 | KM Plot |
| LUAD | rs16946878 | chr17:45821510 | T/C | 1.35E-6 | 501 | 21.9 | 21.93 | 3.97 | KM Plot |
| LUAD | rs17161687 | chr7:98941909 | A/G | 7.06E-7 | 505 | 9.7 | 26.37 | 21 | KM Plot |
| LUAD | rs17250953 | chr17:45821844 | C/G | 1.27E-6 | 502 | 21.88 | 21.93 | 3.97 | KM Plot |
| LUAD | rs17364812 | chr2:10923353 | T/C | 2.16E-12 | 496 | 20.8 | 33.05 | 1.27 | KM Plot |
| LUAD | rs17365015 | chr2:10933024 | C/T | 3.05E-5 | 504 | 20.85 | 31.57 | 4.13 | KM Plot |
| LUAD | rs17455729 | chr2:10928250 | A/G | 3.49E-13 | 505 | 1.27 | 31.6 | 20.57 | KM Plot |
| LUAD | rs17455876 | chr2:10933195 | T/A | 3.05E-5 | 504 | 20.85 | 31.57 | 4.13 | KM Plot |
| LUAD | rs17520779 | chr10:45739470 | G/A | 3.34E-7 | 492 | 22.13 | 21.77 | 10.95 | KM Plot |
| LUAD | rs1767111 | chr10:125308860 | A/C | 1.99E-6 | 496 | 3.97 | 23.47 | 21.75 | KM Plot |